Transcript: ENST00000567480.1 COQ9-008

Description

coenzyme Q9 [Source:HGNC Symbol;Acc:25302]

Gene Synonyms

C16orf49, COQ10D5, DKFZP434K046

Location

Chromosome 16: 57,484,949-57,490,659 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2408 variant alleles and maps to 155 oligo probes.

Gene

This transcript is a product of gene ENSG00000088682.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262507.6	COQ9-001	1677	318aa	ENSP00000262507.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32459	B4DEE3 H3BPY0 O75208	NM_020312.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567072.1	COQ9-005	1482	283aa	ENSP00000456728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564655.1	COQ9-016	935	303aa	ENSP00000454992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNT2 H3BPY0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567933.1	COQ9-012	882	207aa	ENSP00000456174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563391.1	COQ9-010	713	89aa	ENSP00000455516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPY0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565964.1	COQ9-013	581	172aa	ENSP00000458023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BVA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563166.1	COQ9-015	399	102aa	ENSP00000455495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPW3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564115.1	COQ9-014	845	188aa	ENSP00000455256.1	Nonsense mediated decay		B4DEE3 H3BPC6	-	-
ENST00000567384.1	COQ9-011	460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566388.1	COQ9-002	1827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569980.1	COQ9-007	1118	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562734.1	COQ9-004	1039	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568790.1	COQ9-003	1027	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562426.1	COQ9-006	976	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567576.1	COQ9-009	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567480.1	COQ9-008	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 562 bps,

Version

ENST00000567480.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432606 (version 1)

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Transcript: ENST00000567480.1 COQ9-008

Summary