Transcript: ENST00000470168.1 EIF2AK1-002

Description

eukaryotic translation initiation factor 2-alpha kinase 1 [Source:HGNC Symbol;Acc:24921]

Gene Synonyms

HCR, HRI, KIAA1369

Location

Chromosome 7: 6,080,784-6,086,068 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2750 variant alleles and maps to 175 oligo probes.

Gene

This transcript is a product of gene ENSG00000086232.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000199389.6	EIF2AK1-001	4463	630aa	ENSP00000199389.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5345	Q75MR0 Q9BQI3	NM_014413.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536084.1	EIF2AK1-201	2294	577aa	ENSP00000445784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422786.1	EIF2AK1-011	782	72aa	ENSP00000392734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000446699.1	EIF2AK1-004	573	164aa	ENSP00000397590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7U7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431744.1	EIF2AK1-003	806	81aa	ENSP00000392459.1	Nonsense mediated decay		F8WCM0	-	-
ENST00000495565.1	EIF2AK1-008	629	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474029.1	EIF2AK1-007	609	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490523.1	EIF2AK1-010	905	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463213.1	EIF2AK1-006	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461493.1	EIF2AK1-005	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470168.1	EIF2AK1-002	595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 595 bps,

Version

ENST00000470168.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324265 (version 1)

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Transcript: ENST00000470168.1 EIF2AK1-002

Summary