Transcript: ENST00000488942.1 RAD54L-011

Description

RAD54-like (S. cerevisiae) [Source:HGNC Symbol;Acc:9826]

Gene Synonyms

HR54, RAD54A, hHR54, hRAD54

Location

Chromosome 1: 46,738,138-46,744,111 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 3115 variant alleles and maps to 357 oligo probes.

Gene

This transcript is a product of gene ENSG00000085999.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371975.4	RAD54L-001	3108	747aa	ENSP00000361043.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS532	Q92698	NM_003579.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442598.1	RAD54L-201	2549	747aa	ENSP00000396113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS532	Q92698	NM_001142548.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488942.1	RAD54L-011	1121	321aa	ENSP00000476642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469835.1	RAD54L-005	648	202aa	ENSP00000477172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473251.1	RAD54L-008	834	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493985.1	RAD54L-002	810	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459678.1	RAD54L-010	775	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472889.1	RAD54L-004	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463715.1	RAD54L-003	718	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493032.1	RAD54L-007	627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476687.1	RAD54L-009	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487700.1	RAD54L-006	472	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,121 bps, Translation length: 321 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000488942.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000021282 (version 2)

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Transcript: ENST00000488942.1 RAD54L-011

Summary