Transcript: ENST00000572647.1 ZNF213-006

Description

zinc finger protein 213 [Source:HGNC Symbol;Acc:13005]

Gene Synonyms

CR53, ZKSCAN21, ZSCAN53

Location

Chromosome 16: 3,187,405-3,191,533 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 2427 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSG00000085644.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396878.3	ZNF213-001	3313	459aa	ENSP00000380087.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10495	I3L2V8 O14771	NM_004220.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574902.1	ZNF213-003	3208	459aa	ENSP00000460157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10495	I3L2V8 O14771	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576416.1	ZNF213-005	2240	459aa	ENSP00000459177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10495	I3L2V8 O14771	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572647.1	ZNF213-006	1368	182aa	ENSP00000459233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1Z4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416391.2	ZNF213-201	1313	301aa	ENSP00000403892.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DMG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574575.1	ZNF213-008	821	270aa	ENSP00000459293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L216	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000573771.1	ZNF213-007	549	51aa	ENSP00000459967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2V8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576863.1	ZNF213-004	3245	145aa	ENSP00000461024.1	Nonsense mediated decay		I3L2V8 I3L473	-	-
ENST00000574928.1	ZNF213-002	5889	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,368 bps, Translation length: 182 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000572647.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437338 (version 1)

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Transcript: ENST00000572647.1 ZNF213-006

Summary