Transcript: ENST00000494788.1 MAPRE3-007

Description

microtubule-associated protein, RP/EB family, member 3 [Source:HGNC Symbol;Acc:6892]

Gene Synonyms

EB3, EBF3, EBF3-S, RP3

Location

Chromosome 2: 27,193,505-27,245,487 forward strand.

About this transcript

This transcript has 2 exons, is associated with 19511 variant alleles and maps to 122 oligo probes.

Gene

This transcript is a product of gene ENSG00000084764.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000233121.2	MAPRE3-001	1892	281aa	ENSP00000233121.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1731	C9JB30 Q9UPY8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405074.3	MAPRE3-002	1801	266aa	ENSP00000383915.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UPY8	NM_012326.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402218.1	MAPRE3-004	1001	266aa	ENSP00000385715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UPY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458529.1	MAPRE3-003	878	218aa	ENSP00000391705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB30	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491354.1	MAPRE3-008	486	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475633.1	MAPRE3-006	1160	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481222.1	MAPRE3-009	833	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494788.1	MAPRE3-007	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474367.1	MAPRE3-005	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 574 bps,

Version

ENST00000494788.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324729 (version 1)

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Transcript: ENST00000494788.1 MAPRE3-007

Summary