Transcript: ENST00000533581.1 NKAIN1-003

Description

Na+/K+ transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:25743]

Gene Synonyms

FAM77C, FLJ12650

Location

Chromosome 1: 31,658,010-31,661,243 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1414 variant alleles and maps to 73 oligo probes.

Gene

This transcript is a product of gene ENSG00000084628.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373736.2	NKAIN1-001	2589	207aa	ENSP00000362841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS339	Q4KMZ8 R4GNE2	NM_024522.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263693.1	NKAIN1-201	2493	163aa	ENSP00000263693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4KMZ8 R4GNE2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398657.2	NKAIN1-202	1446	136aa	ENSP00000381650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z5F5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526106.1	NKAIN1-004	569	151aa	ENSP00000433225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z5F5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530145.1	NKAIN1-002	562	126aa	ENSP00000473611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNE2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528449.1	NKAIN1-005	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533581.1	NKAIN1-003	512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 512 bps,

Version

ENST00000533581.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381814 (version 1)

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Transcript: ENST00000533581.1 NKAIN1-003

Summary