Transcript: ENST00000466696.1 CHMP2B-005

Description

charged multivesicular body protein 2B [Source:HGNC Symbol;Acc:24537]

Gene Synonyms

ALS17, CHMP2.5, DKFZP564O123, DMT1, VPS2-2, VPS2B

Location

Chromosome 3: 87,302,199-87,303,063 forward strand.

About this transcript

This transcript has 2 exons, is associated with 382 variant alleles and maps to 183 oligo probes.

Gene

This transcript is a product of gene ENSG00000083937.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263780.4	CHMP2B-001	2606	213aa	ENSP00000263780.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2918	B2RE76 Q9UQN3	NM_014043.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471660.1	CHMP2B-002	894	172aa	ENSP00000419998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58840	Q9UQN3	NM_001244644.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494980.1	CHMP2B-004	877	183aa	ENSP00000418920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0A7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472024.1	CHMP2B-003	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466696.1	CHMP2B-005	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 664 bps,

Version

ENST00000466696.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352812 (version 1)

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Transcript: ENST00000466696.1 CHMP2B-005

Summary