Transcript: ENST00000464101.2 UBA5-013

Description

ubiquitin-like modifier activating enzyme 5 [Source:HGNC Symbol;Acc:23230]

Gene Synonyms

FLJ23251, THIFP1, UBE1DC1

Location

Chromosome 3: 132,379,187-132,384,995 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2133 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000081307.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356232.4	UBA5-001	3705	404aa	ENSP00000348565.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3076	C9J0F6 C9J5W5 E7EQ61 Q9GZZ9	NM_024818.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494238.2	UBA5-004	2997	348aa	ENSP00000418807.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3077	C9J0F6 C9J5W5 Q9GZZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264991.4	UBA5-201	2850	348aa	ENSP00000264991.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3077	C9J0F6 C9J5W5 Q9GZZ9	NM_198329.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493720.2	UBA5-014	2058	377aa	ENSP00000417879.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F6 C9J5W5 E7EQ61	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473651.1	UBA5-002	1513	347aa	ENSP00000424984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F6 C9J5W5 E7EWE1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468022.1	UBA5-007	662	79aa	ENSP00000418569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464068.1	UBA5-009	657	110aa	ENSP00000420055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRV9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489361.1	UBA5-010	417	108aa	ENSP00000417905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F6 C9J5W5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505777.1	UBA5-015	576	64aa	ENSP00000427233.1	Nonsense mediated decay		D6RJC9	-	-
ENST00000480955.1	UBA5-005	894	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468227.1	UBA5-003	3902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469158.1	UBA5-011	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464101.2	UBA5-013	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494112.1	UBA5-012	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 570 bps,

Version

ENST00000464101.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358315 (version 1)

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Transcript: ENST00000464101.2 UBA5-013

Summary