Transcript: ENST00000575515.1 NDC80-011

Description

NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:16909]

Gene Synonyms

HEC, HEC1, HsHec1, KNTC2, TID3, hsNDC80

Location

Chromosome 18: 2,571,564-2,577,868 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 2466 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000080986.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261597.4	NDC80-001	2172	642aa	ENSP00000261597.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11827	A8K031 O14777	NM_006101.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576274.2	NDC80-013	1075	168aa	ENSP00000476919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000575515.1	NDC80-011	553	141aa	ENSP00000461227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4G3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574096.1	NDC80-017	442	32aa	ENSP00000458236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0P0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574567.1	NDC80-016	289	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 553 bps, Translation length: 141 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000575515.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000440913 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

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Transcript: ENST00000575515.1 NDC80-011

Summary