Transcript: ENST00000506812.1 KCNN2-003

Description

potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 [Source:HGNC Symbol;Acc:6291]

Gene Synonyms

KCa2.2, SK2, SKCA2, SKCa 2, hSK2

Location

Chromosome 5: 113,822,368-113,831,755 forward strand.

About this transcript

This transcript has 3 exons, is associated with 4422 variant alleles and maps to 266 oligo probes.

Gene

This transcript is a product of gene ENSG00000080709.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000512097.3	KCNN2-001	3216	579aa	ENSP00000427120.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4114	Q9H2S1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264773.3	KCNN2-201	2515	579aa	ENSP00000264773.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4114	Q9H2S1	NM_021614.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503706.1	KCNN2-002	1473	231aa	ENSP00000421439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43352	Q9H2S1	NM_170775.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505491.1	KCNN2-004	879	95aa	ENSP00000421095.1	Nonsense mediated decay		D6RGY7	-	-
ENST00000507750.1	KCNN2-005	754	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506812.1	KCNN2-003	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 741 bps,

Version

ENST00000506812.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000370919 (version 1)

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Transcript: ENST00000506812.1 KCNN2-003

Summary