Description
regulatory factor X, 3 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9984]
Location
Chromosome 9: 3,257,002-3,270,738 reverse strand.
About this transcript
This transcript has 4 exons, is annotated with 2 domains and features, is associated with 6935 variant alleles and maps to 110 oligo probes.
Gene
This transcript is a product of gene ENSG00000080298.11 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000382004.3 | RFX3-006 | 9307 | 749aa | ENSP00000371434.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6449 | F6USP3 F6XM74 P48380 | NM_134428.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000302303.1 | RFX3-201 | 3275 | 707aa | ENSP00000303847.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6450 | F6USP3 F6XM74 P48380 | NM_002919.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000358730.2 | RFX3-005 | 2971 | 707aa | ENSP00000351574.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6450 | F6USP3 F6XM74 P48380 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000449190.1 | RFX3-004 | 869 | 138aa | ENSP00000399352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6XM74 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000457373.1 | RFX3-003 | 822 | 216aa | ENSP00000405664.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6UGA0 F6XM74 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000458034.1 | RFX3-008 | 814 | 174aa | ENSP00000400026.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6USP3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000451859.1 | RFX3-002 | 740 | 184aa | ENSP00000411756.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6UV76 F6XM74 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000449234.1 | RFX3-007 | 633 | 124aa | ENSP00000415594.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y7W5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000442560.1 | RFX3-009 | 526 | 135aa | ENSP00000410988.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y790 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000420720.1 | RFX3-010 | 492 | 156aa | ENSP00000416189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y7Z4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000381984.2 | RFX3-001 | 364 | 85aa | ENSP00000371414.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9Z1Z2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |