Description
LIM and senescent cell antigen-like domains 2 [Source:HGNC Symbol;Acc:16084]
Gene Synonyms
PINCH-2, PINCH2
Location
Chromosome 2: 128,399,700-128,404,253 reverse strand.
About this transcript
This transcript has 3 exons, is associated with 2133 variant alleles and maps to 107 oligo probes.
Gene
This transcript is a product of gene ENSG00000072163.14 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000324938.5 | LIMS2-005 | 2111 | 365aa | ENSP00000326888.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2147 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_017980.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409455.1 | LIMS2-004 | 2500 | 336aa | ENSP00000386383.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54394 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000410011.1 | LIMS2-003 | 2335 | 336aa | ENSP00000387002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54394 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_001161404.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409808.2 | LIMS2-002 | 2315 | 336aa | ENSP00000386637.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54394 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000355119.4 | LIMS2-001 | 2045 | 341aa | ENSP00000347240.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54395 | A0PJ44 Q53RZ1 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_001161403.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000545738.2 | LIMS2-018 | 1730 | 363aa | ENSP00000443794.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54396 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_001136037.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000410038.1 | LIMS2-006 | 1695 | 189aa | ENSP00000386570.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | NM_001256542.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409286.1 | LIMS2-009 | 1678 | 189aa | ENSP00000386252.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409754.1 | LIMS2-008 | 1620 | 189aa | ENSP00000386345.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000426981.1 | LIMS2-007 | 1409 | 169aa | ENSP00000397253.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0PJ44 Q9BV95 Q9H058 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000409254.1 | LIMS2-012 | 867 | 189aa | ENSP00000386907.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000413578.1 | LIMS2-013 | 930 | 60aa | ENSP00000388611.1 | Nonsense mediated decay | F8WEF3 | - | - | |
| ENST00000494613.1 | LIMS2-016 | 1137 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582671.1 | LIMS2-020 | 531 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469300.2 | LIMS2-014 | 4807 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466410.1 | LIMS2-011 | 2592 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476932.1 | LIMS2-017 | 2269 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484252.1 | LIMS2-015 | 2099 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |