Transcript: ENST00000497739.1 PTPN3-002

Description

protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:9655]

Gene Synonyms

PTP-H1, PTPH1

Location

Chromosome 9: 112,151,517-112,160,050 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 3960 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000070159.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374541.2	PTPN3-001	6703	913aa	ENSP00000363667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6776	B7Z8K9 P26045	NM_002829.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412145.1	PTPN3-203	8765	782aa	ENSP00000416654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48001	B7Z8K9 P26045	NM_001145371.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446349.1	PTPN3-204	8630	737aa	ENSP00000395384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48000	B7Z8K9 P26045	NM_001145372.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262539.3	PTPN3-201	2821	759aa	ENSP00000262539.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z8K9 J3KN34	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394827.3	PTPN3-202	2093	381aa	ENSP00000378304.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z8K9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497739.1	PTPN3-002	781	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000447271.1	PTPN3-003	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 781 bps,

Version

ENST00000497739.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053599 (version 1)

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Transcript: ENST00000497739.1 PTPN3-002

Summary