Transcript: ENST00000535845.1 REEP1-201

Description

receptor accessory protein 1 [Source:HGNC Symbol;Acc:25786]

Gene Synonyms

C2orf23, FLJ13110, HMN5B, SPG31

Location

Chromosome 2: 86,441,122-86,564,777 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 48832 variant alleles and maps to 435 oligo probes.

Gene

This transcript is a product of gene ENSG00000068615.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000538924.1	REEP1-202	3735	208aa	ENSP00000438346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54374	E7EUF7 Q9H902	NM_001164730.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000165698.5	REEP1-001	3857	201aa	ENSP00000165698.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1989	Q9H902	NM_022912.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535845.1	REEP1-201	3778	174aa	ENSP00000437567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54372	F8W897 Q9H902	NM_001164731.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541910.1	REEP1-204	3616	143aa	ENSP00000442681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54373	E7ESS5 Q9H902	NM_001164732.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540790.1	REEP1-203	991	180aa	ENSP00000443831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7Z9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489855.2	REEP1-007	958	147aa	ENSP00000475269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000453231.1	REEP1-008	578	190aa	ENSP00000392197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUF7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000428491.1	REEP1-004	546	140aa	ENSP00000400607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W897	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437769.1	REEP1-005	440	120aa	ENSP00000401140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473407.1	REEP1-002	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475475.1	REEP1-009	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490915.1	REEP1-006	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,778 bps, Translation length: 174 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H902

CCDS

This transcript is a member of the Human CCDS set: CCDS54372

Version

ENST00000535845.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000535845.1 REEP1-201

Summary