Transcript: ENST00000495940.2 TFE3-003

Description

transcription factor binding to IGHM enhancer 3 [Source:HGNC Symbol;Acc:11752]

Gene Synonyms

BHLHE33, RCCP2, RCCX1, TFEA, bHLHe33

Location

About this transcript

This transcript has 2 exons, is associated with 475 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315869.7	TFE3-001	3415	575aa	ENSP00000314129.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14315	B4DIA5 P19532	NM_006521.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493583.1	TFE3-004	3274	109aa	ENSP00000476976.1	Nonsense mediated decay		Q5JU74	-	-
ENST00000487451.1	TFE3-006	1058	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481606.1	TFE3-002	439	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495940.2	TFE3-003	758	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 758 bps,

Version

ENST00000495940.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000058874 (version 2)