Transcript: ENST00000376488.3 OTUD5-004

Description

OTU domain containing 5 [Source:HGNC Symbol;Acc:25402]

Gene Synonyms

DKFZp761A052, DUBA

Location

Chromosome X: 48,779,489-48,814,861 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 11936 variant alleles and maps to 689 oligo probes.

Gene

This transcript is a product of gene ENSG00000068308.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000156084.4	OTUD5-003	2740	571aa	ENSP00000156084.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14313	H7BZQ3 Q96G74	NM_017602.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376488.3	OTUD5-004	2692	566aa	ENSP00000365671.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48104	G5E9D7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396743.3	OTUD5-201	2682	566aa	ENSP00000379969.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48104	G5E9D7	NM_001136158.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455452.1	OTUD5-002	2077	444aa	ENSP00000390767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZQ3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000428668.2	OTUD5-006	1493	349aa	ENSP00000401629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48105	Q96G74	NM_001136159.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484499.1	OTUD5-001	924	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481142.1	OTUD5-005	402	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,692 bps, Translation length: 566 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS48104

Version

ENST00000376488.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000060800 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000376488.3 OTUD5-004

Summary