Transcript: ENST00000566281.1 CBFB-011

Description

core-binding factor, beta subunit [Source:HGNC Symbol;Acc:1539]

Gene Synonyms

PEBP2B

Location

Chromosome 16: 67,115,988-67,132,872 forward strand.

About this transcript

This transcript has 2 exons, is associated with 7808 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSG00000067955.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000412916.2	CBFB-003	2971	187aa	ENSP00000415151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45508	J3KRT0 Q13951	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000290858.6	CBFB-001	3136	182aa	ENSP00000290858.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10827	J3KRT0 J3KS23 Q13951	NM_022845.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565389.1	CBFB-002	846	60aa	ENSP00000462932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561924.2	CBFB-007	584	82aa	ENSP00000462273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRT0 J3KS23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563939.2	CBFB-009	545	61aa	ENSP00000462148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564034.1	CBFB-006	509	93aa	ENSP00000456637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568858.1	CBFB-005	914	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567947.1	CBFB-010	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566281.1	CBFB-011	484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 484 bps,

Version

ENST00000566281.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421063 (version 1)

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Transcript: ENST00000566281.1 CBFB-011

Summary