Transcript: ENST00000468491.1 PDZD4-007

Description

PDZ domain containing 4 [Source:HGNC Symbol;Acc:21167]

Gene Synonyms

FLJ34125, KIAA1444, LU1, PDZK4, PDZRN4L

Location

Chromosome X: 153,072,782-153,095,125 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 6951 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSG00000067840.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000164640.4	PDZD4-002	3689	769aa	ENSP00000164640.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14732	Q17RL8 Q76G19	NM_032512.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393758.2	PDZD4-201	3617	694aa	ENSP00000377355.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DWW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544474.1	PDZD4-202	2109	660aa	ENSP00000442033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZKY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480650.2	PDZD4-006	876	122aa	ENSP00000476940.1	Nonsense mediated decay		-	-	-
ENST00000475140.1	PDZD4-003	830	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483693.1	PDZD4-004	829	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484792.1	PDZD4-005	777	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468491.1	PDZD4-007	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480418.1	PDZD4-001	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 665 bps,

Version

ENST00000468491.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000061018 (version 1)

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Transcript: ENST00000468491.1 PDZD4-007

Summary