Transcript: ENST00000478563.1 CDK13-003

Description

cyclin-dependent kinase 13 [Source:HGNC Symbol;Acc:1733]

Gene Synonyms

CDC2L, CDC2L5, CHED, KIAA1791, hCDK13

Location

About this transcript

This transcript has 3 exons, is associated with 6520 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000181839.4	CDK13-001	7298	1512aa	ENSP00000181839.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5461	Q14004	NM_031267.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340829.5	CDK13-002	5066	1452aa	ENSP00000340557.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5462	Q14004	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484589.1	CDK13-004	2111	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465643.1	CDK13-007	2394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478563.1	CDK13-003	700	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 700 bps,

Version

ENST00000478563.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000339436 (version 1)