Transcript: ENST00000561167.1 POU1F1-004

Description

POU class 1 homeobox 1 [Source:HGNC Symbol;Acc:9210]

Gene Synonyms

CPHD1, GHF-1, GHF1, PIT1, POU1F1a, Pit-1

Location

About this transcript

This transcript has 5 exons, is annotated with 19 domains and features, is associated with 7922 variant alleles and maps to 370 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344265.3	POU1F1-002	1149	317aa	ENSP00000342931.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46873	P28069	NM_001122757.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350375.2	POU1F1-001	1491	291aa	ENSP00000263781.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2919	P28069	NM_000306.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561167.1	POU1F1-004	650	216aa	ENSP00000454072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNM5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560656.1	POU1F1-003	647	169aa	ENSP00000452610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK06	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 650 bps, Translation length: 216 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000561167.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415977 (version 1)