Transcript: ENST00000476518.1 ATG5-004

Description

autophagy related 5 [Source:HGNC Symbol;Acc:589]

Gene Synonyms

APG5, APG5-LIKE, APG5L, ASP, hAPG5

Location

Chromosome 6: 106,649,621-106,727,698 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 32775 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000057663.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369076.3	ATG5-001	3216	275aa	ENSP00000358072.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5055	A9UGY9 Q9H1Y0	NM_004849.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343245.3	ATG5-002	3092	275aa	ENSP00000343313.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5055	A9UGY9 Q9H1Y0	NM_001286106.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369070.1	ATG5-003	3088	197aa	ENSP00000358066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69159	Q9H1Y0	NM_001286107.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360666.4	ATG5-201	2697	91aa	ENSP00000353884.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z3H3	NM_001286111.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475645.1	ATG5-005	2659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476518.1	ATG5-004	602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 602 bps,

Version

ENST00000476518.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000043479 (version 2)

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Transcript: ENST00000476518.1 ATG5-004

Summary