Transcript: ENST00000368735.1 TRAF3IP2-002

Description

TRAF3 interacting protein 2 [Source:HGNC Symbol;Acc:1343]

Gene Synonyms

ACT1, C6orf2, C6orf4, C6orf5, C6orf6, CANDF8, CIKS, DKFZP586G0522, PSORS13

Location

Chromosome 6: 111,880,189-111,888,563 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 3136 variant alleles and maps to 304 oligo probes.

Gene

This transcript is a product of gene ENSG00000056972.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368761.5	TRAF3IP2-004	5128	565aa	ENSP00000357750.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5093	O43734	NM_147686.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340026.6	TRAF3IP2-001	2785	574aa	ENSP00000345984.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43734	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392556.4	TRAF3IP2-201	2778	153aa	ENSP00000376339.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43734	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359831.4	TRAF3IP2-005	2264	564aa	ENSP00000352889.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55050	O43734	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368735.1	TRAF3IP2-002	903	109aa	ENSP00000357724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55049	O43734	NM_001164283.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368731.2	TRAF3IP2-006	1407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000368734.1	TRAF3IP2-008	849	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000368730.1	TRAF3IP2-007	737	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492671.1	TRAF3IP2-009	664	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464903.1	TRAF3IP2-003	297	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532708.1	TRAF3IP2-010	1956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528599.1	TRAF3IP2-011	1663	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 903 bps, Translation length: 109 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43734

CCDS

This transcript is a member of the Human CCDS set: CCDS55049

Version

ENST00000368735.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000041842 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000368735.1 TRAF3IP2-002

Summary