Transcript: ENST00000407622.1 COL23A1-201

Description

collagen, type XXIII, alpha 1 [Source:HGNC Symbol;Acc:22990]

Gene Synonyms

DKFZp434K0621

Location

About this transcript

This transcript has 16 exons, is annotated with 7 domains and features, is associated with 145297 variant alleles and maps to 224 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000390654.3	COL23A1-001	3061	540aa	ENSP00000375069.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4436	Q86Y22	NM_173465.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407622.1	COL23A1-201	930	309aa	ENSP00000385092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86Y22	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484750.1	COL23A1-002	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 930 bps, Translation length: 309 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86Y22

Version

ENST00000407622.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.