Transcript: ENST00000263270.6 AP2S1-001

Description

adaptor-related protein complex 2, sigma 1 subunit [Source:HGNC Symbol;Acc:565]

Gene Synonyms

AP17, AP17-DELTA, CLAPS2, HHC3

Location

Chromosome 19: 47,341,424-47,354,249 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 6169 variant alleles and maps to 379 oligo probes.

Gene

This transcript is a product of gene ENSG00000042753.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263270.6	AP2S1-001	935	142aa	ENSP00000263270.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33062	M0QZ21 P53680	NM_004069.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601498.1	AP2S1-005	898	158aa	ENSP00000470176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYZ2 M0QZ21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599990.1	AP2S1-004	829	144aa	ENSP00000471340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZ21 M0R0N4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352203.4	AP2S1-007	793	156aa	ENSP00000263271.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597020.1	AP2S1-002	707	122aa	ENSP00000470235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZ21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593442.1	AP2S1-008	636	92aa	ENSP00000472080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1S0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601649.1	AP2S1-003	315	104aa	ENSP00000470898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12693	P53680	NM_021575.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597421.1	AP2S1-006	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600964.1	AP2S1-010	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598027.1	AP2S1-009	355	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 935 bps, Translation length: 142 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53680

CCDS

This transcript is a member of the Human CCDS set: CCDS33062

Version

ENST00000263270.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000466643 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000263270.6 AP2S1-001

Summary