Transcript: ENST00000040738.5 BOD1L1-001

Description

biorientation of chromosomes in cell division 1-like 1 [Source:HGNC Symbol;Acc:31792]

Gene Synonyms

BOD1L, FAM44A, FLJ33215, KIAA1327

Location

Chromosome 4: 13,570,362-13,629,347 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 27 domains and features, is associated with 25922 variant alleles and maps to 908 oligo probes.

Gene

This transcript is a product of gene ENSG00000038219.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000040738.5	BOD1L1-001	10565	3051aa	ENSP00000040738.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3411	Q8NFC6	NM_148894.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507943.1	BOD1L1-004	1128	207aa	ENSP00000425492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482713.1	BOD1L1-002	4367	93aa	ENSP00000420541.1	Nonsense mediated decay		F8WDD0	-	-
ENST00000511119.1	BOD1L1-003	2049	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505343.1	BOD1L1-006	1202	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509897.1	BOD1L1-005	190	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 10,565 bps, Translation length: 3,051 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NFC6

CCDS

This transcript is a member of the Human CCDS set: CCDS3411

Version

ENST00000040738.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207321 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000040738.5 BOD1L1-001

Summary