Transcript: ENST00000490186.1 CASR-003

Description

calcium-sensing receptor [Source:HGNC Symbol;Acc:1514]

Gene Synonyms

CAR, EIG8, FHH, FIH, GPRC2A, HHC, HHC1, HYPOC1, NSHPT, PCAR1

Location

Chromosome 3: 121,973,178-121,976,485 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1528 variant alleles and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSG00000036828.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000498619.1	CASR-002	5009	1088aa	ENSP00000420194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54632	E7ENE0 Q2F3K2 Q2F3K3 Q2F3K4 Q2F3K5 Q2F3K6	NM_001178065.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490131.1	CASR-001	3783	1078aa	ENSP00000418685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3010	P41180 Q2F3K3 Q2F3K4 Q2F3K5 Q2F3K6	NM_000388.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296154.5	CASR-201	3361	1078aa	ENSP00000296154.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3010	P41180 Q2F3K3 Q2F3K4 Q2F3K5 Q2F3K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490186.1	CASR-003	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 602 bps,

Version

ENST00000490186.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355763 (version 1)

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Transcript: ENST00000490186.1 CASR-003

Summary