Transcript: ENST00000429168.1 SEC63-007

Description

SEC63 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21082]

Gene Synonyms

DNAJC23, ERdj2, PRO2507, SEC63L

Location

Chromosome 6: 108,230,212-108,278,544 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 22956 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSG00000025796.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369002.4	SEC63-001	6411	760aa	ENSP00000357998.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5061	A6PVC9 Q9UGP8	NM_007214.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429168.1	SEC63-007	647	161aa	ENSP00000403144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVC9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446496.1	SEC63-010	583	80aa	ENSP00000410968.1	Nonsense mediated decay		F8WB27	-	-
ENST00000460009.1	SEC63-002	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459782.1	SEC63-004	2025	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484803.1	SEC63-005	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473746.1	SEC63-008	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466419.1	SEC63-003	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489455.1	SEC63-006	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465210.1	SEC63-009	416	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 647 bps, Translation length: 161 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000429168.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316386 (version 1)

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Transcript: ENST00000429168.1 SEC63-007

Summary