Transcript: ENST00000513746.2 SPAG9-019

Description

sperm associated antigen 9 [Source:HGNC Symbol;Acc:14524]

Gene Synonyms

CT89, FLJ13450, FLJ14006, FLJ26141, FLJ34602, HLC-6, HLC4, HSS, JIP-4, JIP4, JLP, KIAA0516, MAPK8IP4, MGC117291, MGC14967, MGC74461, PHET, PIG6, SYD1

Location

Chromosome 17: 49,052,231-49,067,946 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 6373 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSG00000008294.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262013.7	SPAG9-001	8273	1321aa	ENSP00000262013.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45740	H0Y981 O60271	NM_001130528.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510283.1	SPAG9-007	4949	1177aa	ENSP00000423165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58577	H0Y981 O60271 Q5JB53 Q719J0 Q7Z5Q8	NM_001251971.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357122.4	SPAG9-002	4761	1307aa	ENSP00000349636.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11577	H0Y981 O60271	NM_003971.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505279.1	SPAG9-003	4659	1311aa	ENSP00000426900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58578	H0Y981 O60271	NM_001130527.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513906.1	SPAG9-017	750	250aa	ENSP00000430205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000510855.1	SPAG9-011	686	156aa	ENSP00000426061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511795.1	SPAG9-012	522	174aa	ENSP00000429343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBE9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000513746.2	SPAG9-019	822	152aa	ENSP00000423346.2	Nonsense mediated decay		H0Y981	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509724.1	SPAG9-022	681	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513547.1	SPAG9-013	627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000576492.1	SPAG9-024	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514613.1	SPAG9-004	2523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505173.1	SPAG9-005	2369	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511987.1	SPAG9-010	1298	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511312.2	SPAG9-020	943	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506483.1	SPAG9-016	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506500.1	SPAG9-021	828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513827.1	SPAG9-014	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514205.1	SPAG9-018	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502329.1	SPAG9-023	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515685.1	SPAG9-015	292	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 822 bps, Translation length: 152 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000513746.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000368605 (version 1)

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Transcript: ENST00000513746.2 SPAG9-019

Summary