Transcript: ENST00000396093.3 RECQL-007

Description

RecQ protein-like (DNA helicase Q1-like) [Source:HGNC Symbol;Acc:9948]

Gene Synonyms

RECQ1, RECQL1, RecQ1, RecQL1

Location

Chromosome 12: 21,636,376-21,654,603 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 7908 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000004700.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000444129.2	RECQL-001	3702	649aa	ENSP00000416739.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31756	F5GYB7 F5H2L2 F5H3W0 F5H4P4 F8WA66 F8WD97 P46063	NM_032941.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421138.2	RECQL-002	2572	649aa	ENSP00000395449.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31756	F5GYB7 F5H2L2 F5H3W0 F5H4P4 F8WA66 F8WD97 P46063	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000314748.6	RECQL-005	1054	199aa	ENSP00000318727.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB7 F5H2L2 F5H3W0 F5H4P4 F8WA66	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000396093.3	RECQL-007	932	211aa	ENSP00000379400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB7 F5H2L2 F5H3W0 F5H4P4 F8WA66 F8WD97	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542432.1	RECQL-004	600	131aa	ENSP00000445555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB7 F5H2L2 F5H3W0 F5H4P4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539672.1	RECQL-003	579	72aa	ENSP00000440700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536964.1	RECQL-008	578	96aa	ENSP00000446036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB7 F5H4P4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536240.1	RECQL-006	565	106aa	ENSP00000439069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB7 F5H3W0 F5H4P4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 932 bps, Translation length: 211 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000396093.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402373 (version 1)

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Favourite species

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Recent locations

Transcript: ENST00000396093.3 RECQL-007

Summary