Transcript: ENST00000431848.2 MSH5-202

Description

mutS homolog 5 [Source:HGNC Symbol;Acc:7328]

Gene Synonyms

G7, MUTSH5, NG23

Location

Chromosome 6: 31,712,323-31,730,412 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 13 domains and features, is associated with 7893 variant alleles and maps to 2003 oligo probes.

Gene

This transcript is a product of gene ENSG00000204410.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375703.3	MSH5-004	2708	835aa	ENSP00000364855.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34410	O43196 Q5SSR2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534153.4	MSH5-203	3986	851aa	ENSP00000431693.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZX3 O43196	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000375755.3	MSH5-001	3094	834aa	ENSP00000364908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4720	B4DZX3 O43196 Q5SSR2	NM_002441.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000375742.3	MSH5-201	2823	851aa	ENSP00000364894.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZX3 O43196	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000375750.3	MSH5-002	2775	834aa	ENSP00000364903.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4720	B4DZX3 O43196 Q5SSR2	NM_172166.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395853.1	MSH5-006	2704	508aa	ENSP00000379194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ABF0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000375740.3	MSH5-005	2669	822aa	ENSP00000364892.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34409	O43196	NM_025259.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000431848.2	MSH5-202	1879	533aa	ENSP00000416784.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZX3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000450148.1	MSH5-011	1000	333aa	ENSP00000394971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ABE9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000425703.1	MSH5-008	694	194aa	ENSP00000402842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SSR2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429846.1	MSH5-018	616	156aa	ENSP00000406849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ABF1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000423982.2	MSH5-021	2706	637aa	ENSP00000406352.2	Nonsense mediated decay		H7C2J4 Q5SSR2	-	-
ENST00000463144.1	MSH5-010	2296	159aa	ENSP00000419648.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484309.1	MSH5-017	857	166aa	ENSP00000420232.1	Nonsense mediated decay		H0YDS7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497269.1	MSH5-012	764	43aa	ENSP00000419131.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482280.1	MSH5-019	944	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468602.1	MSH5-013	637	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463094.1	MSH5-009	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468136.1	MSH5-022	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467319.1	MSH5-014	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494646.1	MSH5-023	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494458.1	MSH5-016	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Transcript: ENST00000431848.2 MSH5-202

Variants