Chromosome 1: 160,137,415-160,139,813

Add/remove tracks Export image Reset configuration

GRC assembly patches, haplotype (HAPs) and pseudo autosomal regions (PARs)

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

GRC assembly patches, haplotype (HAPs) and pseudo autosomal regions (PARs)

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Region in detail

Loading component

Add/remove tracks Custom tracks Export image Reset configuration Reset track order

Drag/Select:

Human cDNAs from NCBI RefSeq are aligned to the genome using GeneWise.

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Track showing sequence in both directions. Only displayed at 1Kb and below.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Mappings between primary assembly and alternate loci or patches.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Track showing sequence in both directions. Only displayed at 1Kb and below.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Protein coding sequences agreed upon by the Consensus Coding Sequence project, or CCDS.

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Positions of UniGene sequences along the genome. These are determined using TBLASTN of Genscan predictions against UniGene sequences.

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

GRC assembly patches, haplotype (HAPs) and pseudo autosomal regions (PARs)

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Human cDNAs from NCBI RefSeq are aligned to the genome using GeneWise.

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Positions of UniGene sequences along the genome. These are determined using TBLASTN of Genscan predictions against UniGene sequences.

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

GRC assembly patches, haplotype (HAPs) and pseudo autosomal regions (PARs)

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Add/remove tracks Custom tracks Export image Reset configuration Reset track order

Cytogenetic bands

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Timing of the most recent mutation as determined by inter-species whole genome alignments. Each base pair in which the human reference genome differs by substitution from one of its inferred ancestral genomes is colored in either grey (event prior to the primate branch), blue (primate specific), red (human specific, fixed variant), or yellow (human specific segregating variant, i.e. SNP). Clicking on a mutation position reveals the sub-tree of species which have inherited the same mutation from their common ancestor. It also reveals a score that represents the age of the mutation in arbitrary units, and determines the intensity of the coloring. The more recent the mutation, the lower the score and the darker the color.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Protein coding sequences agreed upon by the Consensus Coding Sequence project, or CCDS.

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Track showing underlying assembly contigs.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Variants that have been associated with a phenotype or a disease

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Variants genotyped by the 1000 Genomes project (phase 3)

Change track style:

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Features from Ensembl Regulatory Build.

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

URL to turn this track on

Copy the above url to force this track to be turned on

Click on the star to add/remove this track from your favourites

Click on the cross to turn the track off

Click to highlight/unhighlight this track

Favourite species

All species

Recent locations

Chromosome 1: 160,137,415-160,139,813

Region in detail