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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNPO2 ENSG00000105576

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Description

transportin 2 [Source:HGNC Symbol;Acc:19998]

Gene Synonyms

FLJ12155, IPO3, KPNB2B, TRN2

Location

Chromosome 19: 12,810,008-12,834,825 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 19 transcripts (splice variants), 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000425528.1	TNPO2-201	5122	897aa	ENSP00000407182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45991	K7EMA3 K7ENW1 K7ESC1 O14787	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441499.1	TNPO2-202	5092	887aa	ENSP00000389648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45992	K7EMA3 K7ENW1 K7ESC1 O14787 Q4LE60	NM_001136195.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450764.2	TNPO2-005	4993	887aa	ENSP00000397379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45992	K7EMA3 K7ENW1 K7ESC1 O14787 Q4LE60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356861.5	TNPO2-004	4962	887aa	ENSP00000349321.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45992	K7EMA3 K7ENW1 K7ESC1 O14787 Q4LE60	NM_013433.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588216.1	TNPO2-001	3056	887aa	ENSP00000465625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45992	K7EMA3 K7ENW1 K7ESC1 O14787 Q4LE60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592287.1	TNPO2-002	2914	897aa	ENSP00000468434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45991	K7EMA3 K7ENW1 K7ESC1 O14787	NM_001136196.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589149.1	TNPO2-017	564	117aa	ENSP00000468698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESG1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590781.1	TNPO2-009	547	56aa	ENSP00000466421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMA3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589337.1	TNPO2-016	541	85aa	ENSP00000467115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMA3 K7ENW1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585886.1	TNPO2-007	2362	766aa	ENSP00000468101.1	Non stop decay		K7EMA3 K7ENW1 K7ESC1	-	-
ENST00000586775.1	TNPO2-010	945	109aa	ENSP00000466446.1	Nonsense mediated decay		K7EMA3 K7ENW1 K7ESC1	-	-
ENST00000588491.1	TNPO2-012	737	119aa	ENSP00000466011.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589572.1	TNPO2-013	586	51aa	ENSP00000468739.1	Nonsense mediated decay		K7ESJ3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587654.1	TNPO2-020	575	109aa	ENSP00000468642.1	Nonsense mediated decay		K7EMA3 K7ENW1 K7ESC1	-	-
ENST00000589956.1	TNPO2-018	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587155.1	TNPO2-015	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588151.1	TNPO2-011	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588484.1	TNPO2-019	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587068.1	TNPO2-014	377	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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