Gene: SLC22A5 ENSG00000197375

Description

solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:HGNC Symbol;Acc:10969]

Gene Synonyms

CDSP, OCTN2, OCTN2VT, SCD

Location

Chromosome 5: 131,705,444-131,731,306 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 9 transcripts (splice variants), 16 paralogues and is associated with 5 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245407.3	SLC22A5-001	3237	557aa	ENSP00000245407.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4154	O76082	NM_003060.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435065.2	SLC22A5-201	1746	581aa	ENSP00000402760.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZC0 O76082	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415928.1	SLC22A5-004	720	240aa	ENSP00000388838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZC0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000447841.1	SLC22A5-005	998	37aa	ENSP00000389284.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448810.1	SLC22A5-002	852	136aa	ENSP00000401860.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000437841.2	SLC22A5-008	850	141aa	ENSP00000400553.1	Nonsense mediated decay		F8WCC9	-	-
ENST00000479605.1	SLC22A5-007	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461013.1	SLC22A5-006	10435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475308.1	SLC22A5-003	3693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SLC22A5 ENSG00000197375

Summary