Description
solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 [Source:HGNC Symbol;Acc:10907]
Gene Synonyms
LSH, NRAMP, NRAMP1
Location
Chromosome 2: 219,246,752-219,261,617 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 19 transcripts (splice variants), 1 paralogue and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000233202.6 | SLC11A1-001 | 3852 | 550aa | ENSP00000233202.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2415 | P49279 Q8NDV6 | NM_000578.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000539932.1 | SLC11A1-201 | 2043 | 432aa | ENSP00000443435.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P49279 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000354352.5 | SLC11A1-003 | 2136 | 163aa | ENSP00000346320.5 | Nonsense mediated decay | Q14970 Q8NDV6 Q9HBK0 | - | - | |
| ENST00000473367.1 | SLC11A1-013 | 624 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000486451.1 | SLC11A1-007 | 525 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481524.1 | SLC11A1-014 | 421 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468221.1 | SLC11A1-009 | 5772 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465984.1 | SLC11A1-004 | 2548 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469449.1 | SLC11A1-011 | 2435 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494322.1 | SLC11A1-010 | 1781 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475225.1 | SLC11A1-002 | 1602 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000490536.1 | SLC11A1-012 | 1057 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492413.1 | SLC11A1-006 | 975 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469799.1 | SLC11A1-016 | 695 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471875.1 | SLC11A1-015 | 573 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000490872.1 | SLC11A1-019 | 550 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483487.1 | SLC11A1-017 | 498 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468721.1 | SLC11A1-005 | 358 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460592.1 | SLC11A1-018 | 275 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
