Description
ring finger protein 13 [Source:HGNC Symbol;Acc:10057]
Gene Synonyms
RZF
Location
Chromosome 3: 149,530,495-149,679,926 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 16 transcripts (splice variants), 216 orthologues, 9 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000344229.3 | RNF13-003 | 2866 | 381aa | ENSP00000341361.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3146 | C9J8T4 C9JRV0 C9JU37 C9JYN7 C9JYY4 F8W989 O43567 | NM_007282.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000392894.3 | RNF13-001 | 2843 | 381aa | ENSP00000376628.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3146 | C9J8T4 C9JRV0 C9JU37 C9JYN7 C9JYY4 F8W989 O43567 | NM_183381.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361785.6 | RNF13-002 | 1939 | 262aa | ENSP00000355268.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KR12 C9IY58 C9J7B4 C9JCY0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000491086.1 | RNF13-007 | 1104 | 233aa | ENSP00000420667.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IY58 C9J7B4 C9JCY0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000459632.1 | RNF13-010 | 1008 | 165aa | ENSP00000419069.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J8T4 C9JRV0 C9JU37 C9JYN7 C9JYY4 F8W989 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000468289.1 | RNF13-018 | 820 | 183aa | ENSP00000420510.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000482083.3 | RNF13-017 | 777 | 232aa | ENSP00000418863.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IY58 C9J7B4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000467977.1 | RNF13-008 | 761 | 150aa | ENSP00000418308.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J7B4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000470151.1 | RNF13-005 | 701 | 80aa | ENSP00000419836.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JU37 C9JYY4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000466478.1 | RNF13-006 | 593 | 72aa | ENSP00000419508.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JU37 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000466795.1 | RNF13-011 | 586 | 163aa | ENSP00000417655.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J8T4 C9JRV0 C9JU37 C9JYY4 F8W989 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000490631.1 | RNF13-015 | 583 | 192aa | ENSP00000417294.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J383 C9JRV0 C9JU37 C9JYY4 F8W989 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000468648.1 | RNF13-009 | 570 | 115aa | ENSP00000420067.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JRV0 C9JU37 C9JYY4 F8W989 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000474348.1 | RNF13-014 | 1027 | 140aa | ENSP00000420124.1 | Nonsense mediated decay | C9JRV0 C9JU37 C9JYY4 F8W989 F8WDJ5 | - | - | |
| ENST00000467996.1 | RNF13-016 | 767 | 17aa | ENSP00000419809.1 | Nonsense mediated decay | - | - | - | |
| ENST00000493238.1 | RNF13-019 | 815 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
