Description
retinol dehydrogenase 5 (11-cis/9-cis) [Source:HGNC Symbol;Acc:9940]
Gene Synonyms
9cRDH, HSD17B9, RDH1, SDR9C5
Location
Chromosome 12: 56,114,151-56,118,489 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 11 transcripts (splice variants), 13 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000257895.5 | RDH5-001 | 1269 | 318aa | ENSP00000257895.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31829 | B4DDS2 F8VUB9 F8VVC7 Q92781 | NM_002905.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000548082.1 | RDH5-002 | 1259 | 318aa | ENSP00000447128.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31829 | B4DDS2 F8VUB9 F8VVC7 Q92781 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000547072.1 | RDH5-008 | 1054 | 221aa | ENSP00000449927.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VUB9 F8VVC7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000552930.1 | RDH5-010 | 527 | 55aa | ENSP00000448014.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VUB9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548123.1 | RDH5-007 | 581 | 103aa | ENSP00000447513.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000553160.1 | RDH5-005 | 522 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000550608.1 | RDH5-003 | 1419 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551444.1 | RDH5-011 | 976 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548486.1 | RDH5-004 | 971 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553187.1 | RDH5-009 | 625 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547301.1 | RDH5-006 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
