Description
protein tyrosine phosphatase, receptor type, F [Source:HGNC Symbol;Acc:9670]
Gene Synonyms
LAR
Location
Chromosome 1: 43,990,858-44,089,343 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 18 transcripts (splice variants), 11 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000359947.4 | PTPRF-001 | 7727 | 1907aa | ENSP00000353030.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS489 | G1UI20 P10586 | NM_002840.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000372414.3 | PTPRF-202 | 7439 | 1907aa | ENSP00000361491.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS489 | G1UI20 P10586 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000372413.3 | PTPRF-201 | 7412 | 1898aa | ENSP00000361490.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS490 | G1UI20 P10586 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000438120.1 | PTPRF-002 | 6377 | 1898aa | ENSP00000398822.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS490 | G1UI20 P10586 | NM_130440.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000429895.1 | PTPRF-015 | 6312 | 1553aa | ENSP00000408952.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000414879.1 | PTPRF-006 | 4836 | 1332aa | ENSP00000416343.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F2Z3B8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000422171.2 | PTPRF-203 | 4836 | 1266aa | ENSP00000387885.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F2Z3B8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000372407.4 | PTPRF-005 | 4600 | 979aa | ENSP00000361484.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y380 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000412568.2 | PTPRF-014 | 4154 | 1291aa | ENSP00000391764.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y380 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000437607.1 | PTPRF-013 | 788 | 262aa | ENSP00000413306.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2A437 G1UI20 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000496447.1 | PTPRF-008 | 5887 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000477970.1 | PTPRF-007 | 3321 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000436724.1 | PTPRF-003 | 2168 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000372405.1 | PTPRF-004 | 1962 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467464.1 | PTPRF-011 | 571 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481019.1 | PTPRF-010 | 459 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496043.1 | PTPRF-009 | 415 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463041.1 | PTPRF-012 | 298 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
