Description
patatin-like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:16268]
Gene Synonyms
NTE, NTEMND, SPG39, iPLA2delta, sws
Location
Chromosome 19: 7,598,890-7,626,650 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 24 transcripts (splice variants), 206 orthologues, 1 paralogue and is associated with 9 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000414982.3 | PNPLA6-002 | 4522 | 1375aa | ENSP00000407509.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54206 | Q8IY17 | NM_001166111.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000221249.6 | PNPLA6-001 | 4617 | 1327aa | ENSP00000221249.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32891 | M0QYF5 M0QZD1 M0QZK5 M0R2H4 M0R2K2 Q8IY17 | NM_006702.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000545201.2 | PNPLA6-003 | 4502 | 1300aa | ENSP00000443323.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54207 | M0QYF5 M0QZD1 M0QZK5 M0R2H4 M0R2K2 Q8IY17 | NM_001166112.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000450331.3 | PNPLA6-004 | 4457 | 1327aa | ENSP00000394348.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32891 | M0QYF5 M0QZD1 M0QZK5 M0R2H4 M0R2K2 Q8IY17 | NM_001166113.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000600737.1 | PNPLA6-012 | 4195 | 1365aa | ENSP00000473211.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59343 | Q8IY17 | NM_001166114.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000601001.1 | PNPLA6-011 | 866 | 181aa | ENSP00000472631.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYF5 M0QZD1 M0QZK5 M0R2H4 M0R2K2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000595264.1 | PNPLA6-016 | 800 | 267aa | ENSP00000472456.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000601668.1 | PNPLA6-005 | 753 | 134aa | ENSP00000470608.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYF5 M0QZD1 M0QZK5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000599947.1 | PNPLA6-024 | 669 | 155aa | ENSP00000469171.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000593924.1 | PNPLA6-008 | 584 | 117aa | ENSP00000469794.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYF5 M0QZD1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000594551.1 | PNPLA6-015 | 574 | 192aa | ENSP00000470060.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000600942.1 | PNPLA6-009 | 562 | 153aa | ENSP00000472572.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYF5 M0QZD1 M0QZK5 M0R2H4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000596515.1 | PNPLA6-010 | 543 | 38aa | ENSP00000470461.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QZD1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000594864.1 | PNPLA6-020 | 565 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000599311.1 | PNPLA6-019 | 1005 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000595176.1 | PNPLA6-018 | 999 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000594754.1 | PNPLA6-007 | 989 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000597202.1 | PNPLA6-023 | 658 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000595889.1 | PNPLA6-017 | 602 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000598462.1 | PNPLA6-014 | 585 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000595352.1 | PNPLA6-022 | 563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000602191.1 | PNPLA6-013 | 542 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000599951.1 | PNPLA6-021 | 534 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000594098.1 | PNPLA6-006 | 505 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
