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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PMFBP1 ENSG00000118557

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Description

polyamine modulated factor 1 binding protein 1 [Source:HGNC Symbol;Acc:17728]

Location

Chromosome 16: 72,146,056-72,210,777 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 11 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000537465.1	PMFBP1-003	3935	1022aa	ENSP00000443817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXW3 F5GYR2 F5H0H9 F5H4F8 G3V1Q7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000237353.10	PMFBP1-001	3527	1007aa	ENSP00000237353.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32483	F5GXW3 F5GYR2 F5H0H9 F5H4F8 Q8TBY8	NM_031293.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355636.6	PMFBP1-201	3501	882aa	ENSP00000347854.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TBY8	NM_001160213.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537792.1	PMFBP1-011	955	116aa	ENSP00000443366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5J2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535461.1	PMFBP1-009	559	156aa	ENSP00000444953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXW3 F5GYR2 F5H0H9 F5H4F8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539172.1	PMFBP1-008	556	110aa	ENSP00000440941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXW3 F5GYR2 F5H0H9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536211.1	PMFBP1-010	458	68aa	ENSP00000439841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYR2 F5H0H9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540440.1	PMFBP1-006	407	47aa	ENSP00000440755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYR2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379073.5	PMFBP1-004	3671	101aa	ENSP00000368364.5	Nonsense mediated decay		F5GYR2 F8W771	-	-
ENST00000537392.1	PMFBP1-005	2038	502aa	ENSP00000439564.1	Nonsense mediated decay		H0YFP6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000543746.1	PMFBP1-007	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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