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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PGAP1 ENSG00000197121

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Description

post-GPI attachment to proteins 1 [Source:HGNC Symbol;Acc:25712]

Gene Synonyms

Bst1, FLJ12377, ISPD3024

Location

Chromosome 2: 197,697,728-197,792,520 reverse strand.

GRCh37:CM000664.1

About this gene

This gene has 11 transcripts (splice variants) and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354764.4	PGAP1-001	11114	922aa	ENSP00000346809.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2318	Q75T13	NM_024989.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422444.1	PGAP1-003	6124	159aa	ENSP00000390555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZN8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000409475.1	PGAP1-005	2443	592aa	ENSP00000387028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q75T13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409188.1	PGAP1-006	1246	304aa	ENSP00000386802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DYY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374738.3	PGAP1-011	677	182aa	ENSP00000363870.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NI33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423035.1	PGAP1-002	8942	50aa	ENSP00000415405.1	Nonsense mediated decay		F8WD75	-	-
ENST00000485830.1	PGAP1-007	1222	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459896.1	PGAP1-008	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482051.1	PGAP1-010	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470179.1	PGAP1-004	2874	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476250.1	PGAP1-009	725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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