Description
peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:8850]
Gene Synonyms
PBD1A, PBD1B, ZWS, ZWS1
Location
Chromosome 7: 92,116,334-92,157,845 reverse strand.
GRCh37:CM000669.1
About this gene
This gene has 11 transcripts (splice variants), 201 orthologues, 5 paralogues and is associated with 9 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000248633.4 | PEX1-001 | 4385 | 1283aa | ENSP00000248633.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5627 | B4DER6 O43933 Q96S69 Q96S70 | NM_000466.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000428214.1 | PEX1-004 | 3681 | 1226aa | ENSP00000394413.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS64710 | O43933 Q96S69 Q96S70 | NM_001282677.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000438045.1 | PEX1-002 | 3329 | 961aa | ENSP00000410438.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PE75 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000541751.1 | PEX1-201 | 1411 | 160aa | ENSP00000438637.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DEY5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000422866.1 | PEX1-010 | 734 | 196aa | ENSP00000389594.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000496420.1 | PEX1-005 | 5333 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484913.1 | PEX1-003 | 4051 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000477342.1 | PEX1-008 | 754 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469417.1 | PEX1-007 | 585 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476923.1 | PEX1-009 | 427 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496092.1 | PEX1-006 | 336 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
