Description
podoplanin [Source:HGNC Symbol;Acc:29602]
Gene Synonyms
AGGRUS, GP36, GP40, Gp38, HT1A-1, OTS8, PA2.26, T1A, T1A-2, T1A2, TI1A, aggrus
Location
Chromosome 1: 13,909,960-13,944,452 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 10 transcripts (splice variants) and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000294489.6 | PDPN-001 | 3104 | 238aa | ENSP00000294489.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30602 | H0YA72 Q86YL7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000376057.4 | PDPN-002 | 2801 | 236aa | ENSP00000365225.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41266 | Q86YL7 | NM_198389.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000376061.4 | PDPN-006 | 1368 | 120aa | ENSP00000365229.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44060 | Q86YL7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000513143.1 | PDPN-007 | 1305 | 120aa | ENSP00000425304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44060 | Q86YL7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000475043.1 | PDPN-005 | 849 | 118aa | ENSP00000426063.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53270 | Q86YL7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000510906.1 | PDPN-010 | 786 | 228aa | ENSP00000426302.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YA72 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000487038.1 | PDPN-004 | 607 | 120aa | ENSP00000427537.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44060 | Q86YL7 | NM_001006625.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509009.1 | PDPN-009 | 571 | 157aa | ENSP00000422977.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ETC6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000488631.1 | PDPN-003 | 794 | 43aa | ENSP00000426210.1 | Nonsense mediated decay | D6RH07 | - | - | |
| ENST00000506205.1 | PDPN-008 | 476 | 94aa | ENSP00000421742.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, |
