Description
H2A histone family, member Y [Source:HGNC Symbol;Acc:4740]
Gene Synonyms
H2A.y, H2A/y, H2AF12M, H2AFJ, MACROH2A1, MACROH2A1.1, mH2A1, macroH2A1.2
Location
Chromosome 5: 134,669,590-134,735,604 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 20 transcripts (splice variants), 4 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000511689.1 | H2AFY-001 | 2789 | 372aa | ENSP00000423563.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4185 | O75367 | NM_138610.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000304332.4 | H2AFY-004 | 1881 | 371aa | ENSP00000302572.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4183 | O75367 | NM_004893.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000312469.4 | H2AFY-002 | 1859 | 369aa | ENSP00000310169.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4184 | O75367 | NM_138609.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000510038.1 | H2AFY-005 | 1314 | 372aa | ENSP00000424971.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4185 | O75367 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000423969.2 | H2AFY-003 | 924 | 200aa | ENSP00000415121.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DJC3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000506671.1 | H2AFY-006 | 1905 | 165aa | ENSP00000423718.1 | Nonsense mediated decay | D6RCF2 | - | - | |
| ENST00000512507.1 | H2AFY-009 | 10982 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000360597.4 | H2AFY-008 | 1772 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000451949.2 | H2AFY-010 | 1744 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508785.1 | H2AFY-015 | 966 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513210.1 | H2AFY-016 | 775 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000506532.1 | H2AFY-019 | 677 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508120.1 | H2AFY-021 | 536 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508962.1 | H2AFY-012 | 293 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000505827.1 | H2AFY-023 | 2769 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511494.1 | H2AFY-011 | 2521 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000507868.1 | H2AFY-017 | 861 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000506218.1 | H2AFY-014 | 758 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000513268.1 | H2AFY-018 | 501 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504197.1 | H2AFY-007 | 498 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
