Description
LIM and senescent cell antigen-like domains 2 [Source:HGNC Symbol;Acc:16084]
Gene Synonyms
PINCH-2, PINCH2
Location
Chromosome 2: 128,395,956-128,439,360 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 18 transcripts (splice variants), 14 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000409455.1 | LIMS2-004 | 2500 | 336aa | ENSP00000386383.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54394 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000410011.1 | LIMS2-003 | 2335 | 336aa | ENSP00000387002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54394 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_001161404.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409808.2 | LIMS2-002 | 2315 | 336aa | ENSP00000386637.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54394 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000324938.5 | LIMS2-005 | 2111 | 365aa | ENSP00000326888.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2147 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_017980.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000355119.4 | LIMS2-001 | 2045 | 341aa | ENSP00000347240.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54395 | A0PJ44 Q53RZ1 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_001161403.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000545738.2 | LIMS2-018 | 1730 | 363aa | ENSP00000443794.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54396 | A0PJ44 Q7Z4I5 Q7Z4I7 Q9BV95 Q9H058 | NM_001136037.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000410038.1 | LIMS2-006 | 1695 | 189aa | ENSP00000386570.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | NM_001256542.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409286.1 | LIMS2-009 | 1678 | 189aa | ENSP00000386252.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409754.1 | LIMS2-008 | 1620 | 189aa | ENSP00000386345.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000426981.1 | LIMS2-007 | 1409 | 169aa | ENSP00000397253.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0PJ44 Q9BV95 Q9H058 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000409254.1 | LIMS2-012 | 867 | 189aa | ENSP00000386907.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58725 | A0PJ44 Q7Z4I7 Q9BV95 Q9H058 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000413578.1 | LIMS2-013 | 930 | 60aa | ENSP00000388611.1 | Nonsense mediated decay | F8WEF3 | - | - | |
| ENST00000494613.1 | LIMS2-016 | 1137 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582671.1 | LIMS2-020 | 531 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469300.2 | LIMS2-014 | 4807 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466410.1 | LIMS2-011 | 2592 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476932.1 | LIMS2-017 | 2269 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484252.1 | LIMS2-015 | 2099 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
