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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LHX1 ENSG00000132130

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Description

LIM homeobox 1 [Source:HGNC Symbol;Acc:6593]

Gene Synonyms

LIM-1, LIM1

Location

Chromosome 17: 35,294,084-35,301,917 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 5 transcripts (splice variants) and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254457.5	LHX1-001	4121	406aa	ENSP00000254457.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11316	P48742 Q58F18	NM_005568.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559335.1	LHX1-005	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589584.1	LHX1-004	512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557970.1	LHX1-002	1840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559572.1	LHX1-003	1364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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