Description
LIM domain binding 3 [Source:HGNC Symbol;Acc:15710]
Gene Synonyms
CMD1C, CYPHER, KIAA0613, LDB3Z1, LDB3Z4, LVNC3, MFM4, ORACLE, PDLIM6, ZASP
Location
Chromosome 10: 88,428,206-88,495,825 forward strand.
GRCh37:CM000672.1
About this gene
This gene has 10 transcripts (splice variants), 197 orthologues, 7 paralogues and is associated with 11 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000429277.2 | LDB3-205 | 5436 | 732aa | ENSP00000401437.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53550 | O75112 | NM_001171610.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361373.4 | LDB3-001 | 5297 | 727aa | ENSP00000355296.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7377 | O75112 | NM_007078.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000458213.2 | LDB3-206 | 5091 | 617aa | ENSP00000409148.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41544 | O75112 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000263066.6 | LDB3-201 | 4966 | 617aa | ENSP00000263066.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41544 | O75112 | NM_001080114.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000352360.5 | LDB3-203 | 4650 | 470aa | ENSP00000263067.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O75112 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000372056.4 | LDB3-204 | 1899 | 398aa | ENSP00000361126.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53549 | O75112 | NM_001171611.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542786.1 | LDB3-207 | 1889 | 231aa | ENSP00000438866.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O75112 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000310944.6 | LDB3-202 | 1695 | 330aa | ENSP00000311913.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44450 | B4DND5 O75112 | NM_001080115.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000372066.3 | LDB3-002 | 1598 | 283aa | ENSP00000361136.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41545 | B4DUL3 O75112 | NM_001080116.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000477489.1 | LDB3-005 | 433 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
