Gene: KDM3B ENSG00000120733

Description

lysine (K)-specific demethylase 3B [Source:HGNC Symbol;Acc:1337]

Gene Synonyms

5qNCA, C5orf7, JHDM2B, JMJD1B, KIAA1082, NET22

Location

Chromosome 5: 137,688,285-137,772,717 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 10 transcripts (splice variants), 3 paralogues and is associated with 3 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314358.5	KDM3B-001	6813	1761aa	ENSP00000326563.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34242	F5H275 Q7LBC6	NM_016604.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394866.1	KDM3B-201	5581	1417aa	ENSP00000378335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H275 Q7LBC6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542866.1	KDM3B-202	3034	793aa	ENSP00000439462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H275	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510866.1	KDM3B-002	6324	274aa	ENSP00000425186.1	Nonsense mediated decay		H0Y9V5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507996.1	KDM3B-004	3034	20aa	ENSP00000423012.1	Nonsense mediated decay		H0Y946	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508386.1	KDM3B-009	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505756.1	KDM3B-007	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512928.1	KDM3B-005	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509468.1	KDM3B-008	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504095.1	KDM3B-006	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: KDM3B ENSG00000120733

Summary