Description
HNF1 homeobox A [Source:HGNC Symbol;Acc:11621]
Gene Synonyms
HNF-1A, HNF1, IDDM20, LFB1, MODY3, TCF-1, TCF1
Location
Chromosome 12: 121,416,346-121,440,315 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 14 transcripts (splice variants), 1 paralogue and is associated with 76 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000257555.6 | HNF1A-001 | 3442 | 631aa | ENSP00000257555.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9209 | B8YNU9 B8YNW1 E0YMJ1 E0YMJ2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541395.1 | HNF1A-023 | 3332 | 662aa | ENSP00000443112.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B8YNU9 B8YNW1 F5H5U3 | NM_000545.5 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000402929.1 | HNF1A-003 | 3002 | 520aa | ENSP00000475300.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B8YNU9 B8YNW1 U3KPW5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000400024.2 | HNF1A-002 | 2337 | 542aa | ENSP00000476181.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B8YNU9 B8YNW1 E0YMK2 U3KQS6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000544413.1 | HNF1A-025 | 2014 | 638aa | ENSP00000438804.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B8YNU9 B8YNW1 F5H0K0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000543427.1 | HNF1A-201 | 1493 | 403aa | ENSP00000439721.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B8YNW1 P20823 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000538626.1 | HNF1A-017 | 582 | 124aa | ENSP00000476210.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E0YMK3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000535955.1 | HNF1A-020 | 434 | 114aa | ENSP00000475403.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U3KQ02 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000540108.1 | HNF1A-024 | 3039 | 119aa | ENSP00000445445.1 | Nonsense mediated decay | B8YNU9 E2I9R5 | - | - | |
| ENST00000560968.1 | HNF1A-027 | 3030 | 356aa | ENSP00000453965.1 | Nonsense mediated decay | B8YNU9 E0YMI8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000538646.1 | HNF1A-015 | 1649 | 278aa | ENSP00000443964.1 | Nonsense mediated decay | B8YNU9 P20823 | - | - | |
| ENST00000541924.1 | HNF1A-014 | 1594 | 247aa | ENSP00000440361.1 | Nonsense mediated decay | B8YNU9 P20823 | - | - | |
| ENST00000544574.1 | HNF1A-016 | 725 | 41aa | ENSP00000438565.1 | Nonsense mediated decay | F5H3Z5 | - | - | |
| ENST00000543255.1 | HNF1A-026 | 762 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
