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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FTO ENSG00000140718

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Description

fat mass and obesity associated [Source:HGNC Symbol;Acc:24678]

Gene Synonyms

ALKBH9, KIAA1752, MGC5149

Location

Chromosome 16: 53,737,875-54,155,853 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 9 transcripts (splice variants) and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000471389.1	FTO-001	11766	505aa	ENSP00000418823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32448	B4DHN4 Q9C0B1	NM_001080432.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463855.1	FTO-005	3056	127aa	ENSP00000417843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0B1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000268349.7	FTO-008	2799	129aa	ENSP00000268349.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460382.1	FTO-002	1517	106aa	ENSP00000417422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0B1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394647.3	FTO-201	1065	209aa	ENSP00000378142.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DHN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431610.2	FTO-006	707	106aa	ENSP00000415636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0B1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464071.1	FTO-003	1065	70aa	ENSP00000418424.1	Nonsense mediated decay		F8WCB8	-	-
ENST00000472835.1	FTO-007	847	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000570395.1	FTO-009	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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