Description
protein tyrosine phosphatase, receptor type, C [Source:HGNC Symbol;Acc:9666]
Gene Synonyms
B220, CD45, CD45R, GP180, L-CA, LCA, LY5, T200
Location
Chromosome HSCHR1_3_CTG31: 198,619,288-198,737,899 forward strand.
View this gene on the primary assembly.
About this gene
This gene has 14 transcripts (splice variants), 1 gene allele and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000573679.1 | PTPRC-001 | 5164 | 1304aa | ENSP00000458322.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P08575 Q6LDN6 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 Q6QIR3 Q9H3X6 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000573477.1 | PTPRC-002 | 4626 | 1143aa | ENSP00000461074.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P08575 Q6QIM3 Q6QIN1 Q6QIN9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000576833.1 | PTPRC-005 | 2291 | 733aa | ENSP00000458662.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6LDN6 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000575923.1 | PTPRC-006 | 1962 | 598aa | ENSP00000461347.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000571847.1 | PTPRC-009 | 1338 | 85aa | ENSP00000458418.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000570609.1 | PTPRC-004 | 1017 | 34aa | ENSP00000458191.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0VAE8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000573298.1 | PTPRC-011 | 517 | 146aa | ENSP00000458846.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6QIN1 Q6QIN9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573971.1 | PTPRC-003 | 462 | 116aa | ENSP00000461712.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6QIR3 Q9H3X6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000574441.1 | PTPRC-010 | 2336 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000574718.1 | PTPRC-014 | 408 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000572593.1 | PTPRC-013 | 264 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000574399.1 | PTPRC-007 | 926 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000575803.1 | PTPRC-008 | 648 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570905.1 | PTPRC-012 | 612 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
